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pelB

Gene
pelB
Protein
Periplasmic pectate lyase
Organism
Pectobacterium carotovorum subsp. carotovorum
Length
568 amino acids
Similarity
Belongs to the polysaccharide lyase 2 family.
Mass
63.524 kDa
Sequence
MKRFALSLLAGLVALQASAATPDRLTIVNQYVDNVLTKAGDHYHGQSPTPLLADGVDPRTGKQMEWIFPDGRHAVLSNFSAQQNLMRVLVGLSNLSGNPSYKQRAEAIVKYHFQHYQDESGLLIWGGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFSVDKDATARFIRGFWNAHVYDWKIMETSRHGKYGQKIGALWQSPFEQQPPFFATKGLSFLNAGNDLIYSASLLYKYNKEDGALVWAKRLAQQYVLPRDKATGLGVYQFTQALKRDETTDDADTHSKYGDRAQRQFGPEFGPTALEGNMMLKGRTSTIYSENALMQLQLGKDLGAEGKELLTWTTDGLKAFAKYAYNESDNTFRPMLANGKDLSNYVLPRDGYYGKKGTVIKPYPADNSFLLSYARAYTVLPDAELWRVARGIARAQGLGELGSAPGKDVKVDLATKNNDPYALFALLDLYQASKVKDYLSLAEKVGDNIISTRYQNGFFMAEPNRQYADVDTIEPYALLALEAAVRNQPQSVAPFLNGAGFTEGGYRMEDGSTRVSTRDNEIFLLNVGETLKPNNKK

Gene
pelB
Protein
Pectate lyase B
Organism
Paenibacillus amylolyticus
Length
391 amino acids
Function
Catalyzes the depolymerization of both polygalacturonate and pectins of various methyl esterification degree, with an endo mode of action. Shows the highest activity on 20 to 34% methylated pectin but retains 67%, 51%, 25%, and 1% of its maximum activity on polygalacturonate and 8.5%, 55 to 70%, and 90% methylated pectin, respectively.
Similarity
Belongs to the polysaccharide lyase 1 family.
Mass
42.204 kDa
Sequence
MKKTVRSLCSTALALTLGFTLLSGPASVQAAGNADYNLAGFSQGNTGGGIISESNTSTYKKVYNATDLALALKKNSGVKVVEIMNDLDLGWNEIPSAAQTSPFAKHNDALTHPVLKQTGVSKITVDGFNGLTIFSANGSKIKHAAITVKRSSNVIIRNLEFDELWEWDESTKGDYDKNDWDYITLEDSSGVWIDHCTFNKAYDGLVDSKKGTSGVTISWSTFKGDDGSANSWVTRQINELEANKASYPMYNYLRSSAVGLSKQDVIAISGPQKKGHLVGATSLESANANLSITLHHNLYKDIQDRMPRLRGGNAHAYNIIMDAADARSAQSRITSAMATAIASKGYKFGITSNGAISTESGAVLVEKSVIKDVQXPCTQQSDRSDQRHVHR

Gene
pelB
Protein
Probable pectin lyase B
Organism
Aspergillus niger (strain CBS 513.88 / FGSC A1513)
Length
379 amino acids
Function
Pectinolytic enzymes consist of four classes of enzymes: pectin lyase, polygalacturonase, pectin methylesterase and rhamnogalacturonase. Among pectinolytic enzymes, pectin lyase is the most important in depolymerization of pectin, since it cleaves internal glycosidic bonds of highly methylated pectins (By similarity).
Similarity
Belongs to the polysaccharide lyase 1 family.
Mass
39.854 kDa
Sequence
MHYKLLFAAAAASLASAVSAAGVVGAAEGFAHGVTGGGSASPVYPTTTDELVSYLGDNEPRVIILDRTFDFTGTEGTETTTGCAPWGTASQCQVAINLHSWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNTVVETPISGQLFSSPDANTNQQCASVFGRSCQLNAFGNSGSMSGSDTSIISKFAGKTIAAAHPPGNIAQWTMKNAGQGK

Gene
pelB
Protein
Pectin lyase B
Organism
Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Length
379 amino acids
Function
Pectinolytic enzymes consist of four classes of enzymes: pectin lyase, polygalacturonase, pectin methylesterase and rhamnogalacturonase. Among pectinolytic enzymes, pectin lyase is the most important in depolymerization of pectin, since it cleaves internal glycosidic bonds of highly methylated pectins.
Similarity
Belongs to the polysaccharide lyase 1 family.
Mass
39.351 kDa
Sequence
MRLHAPILSLLAAAASTSAAGVTGSAEGFAKGVTGGGSATPVYPSTTAELVSYLGDSSARVIVLTKTFDFTGTEGTTTETGCAPWGTASACQVAINKNDWCTNYQPNAPSVSVTYDNAGVLGITVKSNKSLVGEGSSGVIKGKGLRIVSGASNVIIQNIAITDLNPKYVWGGDAITLDNADMVWIDHVTTARIGRQHLVLGTSASNRVTVSNSYFNGVTSYSATCDGYHYWGIYLTGSNDMVTLKGNYIYHMSGRSPKVGGNTLLHAVNNYWYDSSGHAFEIDSGGYVLAEGNVFQNIPTVIEGTVGGQLFTSPDSSTNAICSTYLGHTCQVNGFGSSGTFKQADTAFLVNFQGKNIASASAYTVAQSSVPSNAGQGKL

Gene
pelB
Protein
Probable pectin lyase B
Organism
Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
Length
378 amino acids
Function
Pectinolytic enzymes consist of four classes of enzymes: pectin lyase, polygalacturonase, pectin methylesterase and rhamnogalacturonase. Among pectinolytic enzymes, pectin lyase is the most important in depolymerization of pectin, since it cleaves internal glycosidic bonds of highly methylated pectins (By similarity).
Similarity
Belongs to the polysaccharide lyase 1 family.
Mass
39.382 kDa
Sequence
MKYQDLLAIAGCIANAGAVSVSGAAEGFAKGVTGGGSATAVYPSTTAELVSYLGDSEARVIVLTKTFDFTGTEGTTTATGCAPWGTASACQLAINQNNWCTNYEPNAPSVSVTYDNAGILGITVKSNKSLIGSGSSGVIKGKGLRIVSGASNIIIQNIAITDINPKYVWGGDAITIDNADMVWIDHVTTARIGRQHLVLGTSASNRVTISNNYFNGVSSYSATCDGYHYWGIYLDGSNDLVTMKGNYIYHFSGRSPKVQGNTLLHAVNNYWYDSSGHAFEIGSGGYVLAEGNVFQNIDTIVQSPVDGQLFTSPDSNTNKVCSTYLGHVCQVNGFGSSGTFSQADTGFLSNFAGKNIASASAYTAVQSTVPSSAGQGKI

Gene
pelB
Protein
Pectin lyase B
Organism
Aspergillus niger
Length
378 amino acids
Function
Pectinolytic enzymes consist of four classes of enzymes: pectin lyase, polygalacturonase, pectin methylesterase and rhamnogalacturonase. Among pectinolytic enzymes, pectin lyase is the most important in depolymerization of pectin, since it cleaves internal glycosidic bonds of highly methylated pectins (By similarity).
Similarity
Belongs to the polysaccharide lyase 1 family.
Mass
39.703 kDa
Sequence
MHYKLLFAAAAASLASAVSAAGVVGAAEGFAHGVTGGGSASPVYPTTTDELVSYLGDNEPRVIILDRTFDFTGTEGTETTTGCAPWGTASQCQVAINLHSWCDNYQASAPKVSVTDKAGILPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNIVVETPISGQLFSSPDANTNQQCASVFGRSCQLNAFGNSGSMSGSDTSIISKFAGKTIAAAHPPGNIAQWTMKNAGQGK

Gene
pelB
Protein
Pectate lyase B
Organism
Dickeya chrysanthemi
Length
375 amino acids
Function
Involved in maceration and soft-rotting of plant tissue.
Similarity
Belongs to the polysaccharide lyase 1 family. PLADES subfamily.
Mass
40.234 kDa
Sequence
MKSLITPIAAGLLLAFSQYSLAADTGGYTKTDGGDVSGAVKKTASSMQDIVNIIEAAKVDANGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKDARGVEIKDFTKGLTIIGANGSSANFGIWIVNSSDIVVRNMRIGYLPGGAQDGDMFRIDNSPNVWLDHNELFAANHECDGTKDGDTTFESAIDIKKGATYVTISYNYIHGVKKVGLSGFSSSDTAERNITYHHNIYSDVNARLPLQRGGNVHAYNNLYTGITSSGLNVRQNGKALIENNWFENAVSPVTSRYDGSNFGTWVLKGNNITKPADFATYNITWTPDTKEYRNADTWTSTGTYPTVPYSYSPVSAQCVKDKLANYAGVGKNLATLASSACK

Gene
pelB
Protein
Probable pectin lyase B
Organism
Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
Length
375 amino acids
Function
Pectinolytic enzymes consist of four classes of enzymes: pectin lyase, polygalacturonase, pectin methylesterase and rhamnogalacturonase. Among pectinolytic enzymes, pectin lyase is the most important in depolymerization of pectin, since it cleaves internal glycosidic bonds of highly methylated pectins (By similarity).
Similarity
Belongs to the polysaccharide lyase 1 family.
Mass
39.022 kDa
Sequence
MKYAAFLPTIGALVSQAIAIGVQGTAEGFASSVTGGGSATPVYPSTTDELVSYLGDSEARVIVLTKTFDFTGTEGTTTATGCAPWGTASGCQVAINKDNWCTNYQSSAPSVSVTYDNAGSLGITVNSNKSLIGEGTSGVIKGKGLRIVSGAKNIIIQNIAITDINPKYVWGGDAITINQADLVWVDHVTTARIGRQHYVLGTEASNRITLSNNYIDGESDYSATCDNHHYWNIYLDGSSDKVTLKGNYLYKTSGRAPKVQGNTYLHAVNNYWNDNSNHAFEIGDGAYVLAEGNLFSDVTAAVESSSFTGELFGSASASSTCQSYIGRDCVANSFSSSGTLSGSNVDVLSKFKGETVASASAAGTSPASSAGQGHL

Gene
pelB
Protein
Pectin lyase
Organism
Bacillus subtilis (strain 168)
Length
345 amino acids
Function
Catalyzes the depolymerization of pectins of methyl esterification degree from 13 to 75%, with an endo mode of action. Cannot degrade polygalacturonate (By similarity).
Similarity
Belongs to the polysaccharide lyase 1 family.
Mass
38.108 kDa
Sequence
MKRLCLWFTVFSLFLVLLPGKALGAVDFPNTSTNGLLGFAGNAKNEKGISKTGTTGGKNGQIVYIQSVNDLKTHLGGSTPKILVLQNDLSASAKTTVTIGSNKTLVGSYAKKTLKNIYLTTSSAFGNVIFQNLTFEHSPQINGNNDIQLYLDSGMNYWIDHVTFSGHSYNASGSDLDKLVYIGKSADYITISNSKFANHKYGLILGYPDDSQHQYDGYPHMTIANNYFENLYVRGPGLMRYGYFHVKNNYSNNFNQAITIATKAKIYSEYNYFGKGSEKGGILDDKGTGYFKDIGSYPSLNKQTSPLTSWNPGSNYSYRVQTPEYTKEFVTKYAGSQSTTLVFGY

Gene
pelB
Protein
Pectin lyase
Organism
Bacillus subtilis
Length
345 amino acids
Function
Catalyzes the depolymerization of pectins of methyl esterification degree from 13 to 75%, with an endo mode of action. Cannot degrade polygalacturonate. Also displays protopectinase activity, i.e. releases pectin from protopectin.
Similarity
Belongs to the polysaccharide lyase 1 family.
Mass
37.996 kDa
Sequence
MKRFCLWFAVFSLLLVLLPGKAFGAVDFPNTSTNGLLGFAGNAKNEKGISKASTTGGKNGQIVYIQSVNDLKTHLGGSTPKILVLQNDISASSKTTVTIGSNKTLVGSYAKKTLKNIYLTTSSASGNVIFQNLTFEHSPQINGNNDIQLYLDSGINYWIDHVTFSGHSYSASGSDLDKLLYVGKSADYITISNSKFANHKYGLILGYPDDSQHQYDGYPHMTIANNYFENLYVRGPGLMRYGYFHVKNNYSNNFNQAITIATKAKIYSEYNYFGKGSEKGGILDDKGTGYFKDTGSYPSLNKQTSPLTSWNPGSNYSYRVQTPQYTKDFVTKYAGSQSTTLVFGY