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pc1

Gene
pc1
Protein
RNA-dependent RNA polymerase
Organism
Rice stripe virus (isolate T)
Length
2919 amino acids
Function
RNA-dependent RNA polymerase which is responsible for replication and transcription of the viral RNA genome. The replicase function is to direct synthesis of antigenomic and genomic RNA which are encapsidated and non capped.
Mass
336.877 kDa
Sequence
MTTPPLVIPLHVHGRSYELLAGYHEVDWQEIEELEETDVRGDGFCLYHSILYSMGLSKENSRTTEFMIKLRSNPAICQLDQEMQLSLMKQLDPNDSSAWGEDIAIGFIAIILRIKIIAYQTVDGKLFKTIYGAEFESTIRIRNYGNYHFKSLETDFDHKVKLRSKIEEFLRMPVEDCESISLWHASVYKPIVSDSLSGHKSFSNVDELIGSIISSMYKIMDNGDQCFLWSAMRMVARPSEKLYALAVFLGFNLKFYHVRKRAEKLTAKLESDHTNLGVKLIEVYEVSEPTRSTWVLKPGGSRITETRNFVIEEIIDNRRSLESLFVSSSEYPAELCSQKLSAIKDRIALMFGFINRTPENSGRELYINTYYLKRILQVERNVIRDSLRSQPAVGMIQIIRLPTAFGTYNPEVGTLLLAQTGLIYRLGTTTRVQMEVRRSPSVISRSHKITSFPETQKHNNNLYDYAPRTQETFYHPNAEIYEAVDVKTPSVITEIVDNHIVIKLNTDDKGWSVSDSIKQDFVYRKRLMDAKNIVHDFVFDILSTETDKSFKGADLSIGGISDNWSPDVIISRESDPQYEDIVVYEFTTRSTESIESLLRSVEVKSLRYKEAIQERAITLKKRISYYTICVSLDAVATNLLSLPADVCRELIIRLRVANQVKIQLADNDINLDSATLLAPDIYRIKEMFRESFPNNKFIHPITKEMYEHFVNPMISGEKDYVANLKSIIDKETRDEQRKNLESLKVVDGKKYTERKAETALNEMSQAEEHYRSYFENDNFRSTLKAPVQLPLIIPDVSSQDNQFSNKELSDRIRKKPIDHPIYNIWDQAVNKRNCSIALGHLDELEISMLEGQVAKKVEESYKKDRSQYNRTTLLTNMKEDIYLAERGINAKKRLEEPDVKFYRDQSKRPFHPFVSETRDIEQFTQKECLELNEESGHCSLINVEDLVLSALELHEVGDLEHLWNNIKAHSKTKFALYAKFISDLATELAISLSQNCKEDTYVVKKLRDFSCYVLIKPVNLKSNVFFSLYIPSNIYKSHNTTFKTLIGSPESGYMTDFVSANVSKLVNWVRCEAMMLAQRGFWREFYAVAPSIEEQDGMAEPDSVCQMMSWTLLILLNDKHQLEEMITVSRFVHMEGFVTFPAWPKPYKMFDKLSVTPRSRLECLVIKRLIMLMKHYSENPIKFMIEDEKKKWFGFKNMFLLDCNGKLADLSDQDQMLNLFYLGYLKNKDEEVEDNGMGQLLTKILGFESAMPKTRDFLGMKDPEYGTIKKHEFSISYVKDLCDKFLDRLKKTHGIKDPITYLGDKIAKFLSTQFIETMASLKASSNFSEDYYLYTPSRRLKNQEQSRSKHVIDAGGNISASVKGKLYHRSKVIEKLTTLIKDETPGKELKIVVDLLPKAMEVLNKNECMHICIFKKNQHGGLREIYVLNIFERIMQKTVEDFSRAILECCPSETMTSPKNKFRIPELHNMEARKTLKNEYMTISTSDDASKWNQGHYVSKFMCMLLRLTPTYYHGFLVQALQLWHHKKIFLGDQLLQLFNQNAMLNTMDTTLMKVFQAYKGEIQVPWMKAGRSYIETETGMMQGILHYTSSLFHAIFLDQLAEECRRDINRAIKTINNKENEKVSCIVNNMESSDDSSFIISIPNFKENEAAQLYLLCVVNSWFRKKEKLGTYLGIYKSPKSTTQTLFVMEFNSEFFFSGDVHRPTFRWVNAAVLIGEQETLSGIQEELSNTLKDVIEGGGTYALTFIVQVAQAMIHYRMLGSSASSVWPAYETLLKNSYDPALGFFLMDNPKCAGLLGFNYNVWIACTTTPLGEKYHEMIQEEMKAESQSLKSVTEDTINTGLVSRTTMVGFGNKKRWMKLMTTLNLSADVYEKIEEEPRVYFFHAATAEQIIQKIAIKMKSPGVIQSLSKGNMLARKIASSVFFISRHIVFTMSAYYDADPETRKTSLLKELINSSKIPQRHDYLQEPHTLKPTKVEVDEDSWEFKSAKEECVRVLKQRIKIHTGREERSISLLFENMAKSMIGRCTDQYDVRENVSILACALKMNYSIFKKDAAPNRYLLDEKNLVYPLIGKEVSVYVKSDKVHIEISEKKERLSTKLFNIDKMKDIEETLSLLFPSYGDYLSLKETIDQVTFQSAIHKVNERRRVRADVHLTGTEGFSKLPMYTAAVWAWFDVKTIPAHDSIYRTIWKVYKEQYSWLSDTLKETVEKGPFKTVQGVVNFISRAGVRSRVVHLVGSFGKNVRGSINLVTAIKDNFSNGLVFKGNIFDIKAKKTRESLDNYLSICTTLSQAPITKHDKNQILRSLFVSGPRIQYVSSQFGSRRNRMSILQEVVADDPTLHWPDQDTSQKQLEDKFRELAHKELPFLTEKVFHDYLEKIEQLMKENTHLGGRDVDASKTPYVLARANDIEIHCYELWREYDEDEDEAYQAYCSEVEAAMDQEKLNALIERYHVDPKANWIQMLMNGEIETVEELNKLDKGFESHRLALVERIRVGKLGILGSYTKCQQRIEELDGEGNKTHRYTGEGIWRGSFDDSDVCIVVQDLKKTRESYLKCVVFSKVSDYKVLMGHLKTWCREHHISNDEFPTCTQKELLSYGVTKSSVLLYKMNGMKMLRNMEKGIPLYWNPSLSTRSQTYINWLAVDITDHSLRLRNRTVENGRVVNQTIMVVPLYKTDVQIFKTSPVDLEQDVQNDRLKLLSVTKAGELRWLQDWIMWRSSAVDDLNILNQVRRNKAARDHFNAKPEFKKWIKELWDYALDTTLINKKVFITTQGSESQSTVSSGDSDSAVAPLTDEAVDEIHDLLDKELEKGTLKQIIHDATIDAQLDIPAIESFLAEEMEVFKSSLAKSHPLLLNYVRYMIQEIGVTNFRSLIDSFNQKDPLKSVSLSILDLKEVFKFVYQDINDAYFVKQEEDHKFDF