Protein
RNA-dependent RNA polymerase
Organism
Rice stripe virus (isolate T)
Function
RNA-dependent RNA polymerase which is responsible for replication and transcription of the viral RNA genome. The replicase function is to direct synthesis of antigenomic and genomic RNA which are encapsidated and non capped.
Sequence
MTTPPLVIPLHVHGRSYELLAGYHEVDWQEIEELEETDVRGDGFCLYHSILYSMGLSKENSRTTEFMIKLRSNPAICQLDQEMQLSLMKQLDPNDSSAWGEDIAIGFIAIILRIKIIAYQTVDGKLFKTIYGAEFESTIRIRNYGNYHFKSLETDFDHKVKLRSKIEEFLRMPVEDCESISLWHASVYKPIVSDSLSGHKSFSNVDELIGSIISSMYKIMDNGDQCFLWSAMRMVARPSEKLYALAVFLGFNLKFYHVRKRAEKLTAKLESDHTNLGVKLIEVYEVSEPTRSTWVLKPGGSRITETRNFVIEEIIDNRRSLESLFVSSSEYPAELCSQKLSAIKDRIALMFGFINRTPENSGRELYINTYYLKRILQVERNVIRDSLRSQPAVGMIQIIRLPTAFGTYNPEVGTLLLAQTGLIYRLGTTTRVQMEVRRSPSVISRSHKITSFPETQKHNNNLYDYAPRTQETFYHPNAEIYEAVDVKTPSVITEIVDNHIVIKLNTDDKGWSVSDSIKQDFVYRKRLMDAKNIVHDFVFDILSTETDKSFKGADLSIGGISDNWSPDVIISRESDPQYEDIVVYEFTTRSTESIESLLRSVEVKSLRYKEAIQERAITLKKRISYYTICVSLDAVATNLLSLPADVCRELIIRLRVANQVKIQLADNDINLDSATLLAPDIYRIKEMFRESFPNNKFIHPITKEMYEHFVNPMISGEKDYVANLKSIIDKETRDEQRKNLESLKVVDGKKYTERKAETALNEMSQAEEHYRSYFENDNFRSTLKAPVQLPLIIPDVSSQDNQFSNKELSDRIRKKPIDHPIYNIWDQAVNKRNCSIALGHLDELEISMLEGQVAKKVEESYKKDRSQYNRTTLLTNMKEDIYLAERGINAKKRLEEPDVKFYRDQSKRPFHPFVSETRDIEQFTQKECLELNEESGHCSLINVEDLVLSALELHEVGDLEHLWNNIKAHSKTKFALYAKFISDLATELAISLSQNCKEDTYVVKKLRDFSCYVLIKPVNLKSNVFFSLYIPSNIYKSHNTTFKTLIGSPESGYMTDFVSANVSKLVNWVRCEAMMLAQRGFWREFYAVAPSIEEQDGMAEPDSVCQMMSWTLLILLNDKHQLEEMITVSRFVHMEGFVTFPAWPKPYKMFDKLSVTPRSRLECLVIKRLIMLMKHYSENPIKFMIEDEKKKWFGFKNMFLLDCNGKLADLSDQDQMLNLFYLGYLKNKDEEVEDNGMGQLLTKILGFESAMPKTRDFLGMKDPEYGTIKKHEFSISYVKDLCDKFLDRLKKTHGIKDPITYLGDKIAKFLSTQFIETMASLKASSNFSEDYYLYTPSRRLKNQEQSRSKHVIDAGGNISASVKGKLYHRSKVIEKLTTLIKDETPGKELKIVVDLLPKAMEVLNKNECMHICIFKKNQHGGLREIYVLNIFERIMQKTVEDFSRAILECCPSETMTSPKNKFRIPELHNMEARKTLKNEYMTISTSDDASKWNQGHYVSKFMCMLLRLTPTYYHGFLVQALQLWHHKKIFLGDQLLQLFNQNAMLNTMDTTLMKVFQAYKGEIQVPWMKAGRSYIETETGMMQGILHYTSSLFHAIFLDQLAEECRRDINRAIKTINNKENEKVSCIVNNMESSDDSSFIISIPNFKENEAAQLYLLCVVNSWFRKKEKLGTYLGIYKSPKSTTQTLFVMEFNSEFFFSGDVHRPTFRWVNAAVLIGEQETLSGIQEELSNTLKDVIEGGGTYALTFIVQVAQAMIHYRMLGSSASSVWPAYETLLKNSYDPALGFFLMDNPKCAGLLGFNYNVWIACTTTPLGEKYHEMIQEEMKAESQSLKSVTEDTINTGLVSRTTMVGFGNKKRWMKLMTTLNLSADVYEKIEEEPRVYFFHAATAEQIIQKIAIKMKSPGVIQSLSKGNMLARKIASSVFFISRHIVFTMSAYYDADPETRKTSLLKELINSSKIPQRHDYLQEPHTLKPTKVEVDEDSWEFKSAKEECVRVLKQRIKIHTGREERSISLLFENMAKSMIGRCTDQYDVRENVSILACALKMNYSIFKKDAAPNRYLLDEKNLVYPLIGKEVSVYVKSDKVHIEISEKKERLSTKLFNIDKMKDIEETLSLLFPSYGDYLSLKETIDQVTFQSAIHKVNERRRVRADVHLTGTEGFSKLPMYTAAVWAWFDVKTIPAHDSIYRTIWKVYKEQYSWLSDTLKETVEKGPFKTVQGVVNFISRAGVRSRVVHLVGSFGKNVRGSINLVTAIKDNFSNGLVFKGNIFDIKAKKTRESLDNYLSICTTLSQAPITKHDKNQILRSLFVSGPRIQYVSSQFGSRRNRMSILQEVVADDPTLHWPDQDTSQKQLEDKFRELAHKELPFLTEKVFHDYLEKIEQLMKENTHLGGRDVDASKTPYVLARANDIEIHCYELWREYDEDEDEAYQAYCSEVEAAMDQEKLNALIERYHVDPKANWIQMLMNGEIETVEELNKLDKGFESHRLALVERIRVGKLGILGSYTKCQQRIEELDGEGNKTHRYTGEGIWRGSFDDSDVCIVVQDLKKTRESYLKCVVFSKVSDYKVLMGHLKTWCREHHISNDEFPTCTQKELLSYGVTKSSVLLYKMNGMKMLRNMEKGIPLYWNPSLSTRSQTYINWLAVDITDHSLRLRNRTVENGRVVNQTIMVVPLYKTDVQIFKTSPVDLEQDVQNDRLKLLSVTKAGELRWLQDWIMWRSSAVDDLNILNQVRRNKAARDHFNAKPEFKKWIKELWDYALDTTLINKKVFITTQGSESQSTVSSGDSDSAVAPLTDEAVDEIHDLLDKELEKGTLKQIIHDATIDAQLDIPAIESFLAEEMEVFKSSLAKSHPLLLNYVRYMIQEIGVTNFRSLIDSFNQKDPLKSVSLSILDLKEVFKFVYQDINDAYFVKQEEDHKFDF