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jmjd6-b

Gene
jmjd6-b
Protein
Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-B
Organism
Xenopus laevis
Length
403 amino acids
Function
Dioxygenase that can both act as a arginine demethylase and a lysyl-hydroxylase. Acts as a lysyl-hydroxylase that catalyzes 5-hydroxylation on specific lysine residues of target proteins such as u2af2/u2af65 and LUC7L2. Regulates RNA splicing by mediating 5-hydroxylation of u2af2/u2af65, affecting the pre-mRNA splicing activity of u2af2/u2af65. Hydroxylates its own N-terminus, which is required for homooligomerization. In addition to peptidyl-lysine 5-dioxygenase activity, may act as an RNA hydroxylase, as suggested by its ability to bind single strand RNA. Also acts as an arginine demethylase which preferentially demethylates asymmetric dimethylation. Demethylates histone H3 at 'Arg-2' (H3R2me) and histone H4 at 'Arg-3' (H4R3me), including mono-, symmetric di- and asymmetric dimethylated forms, thereby playing a role in histone code. However, histone arginine demethylation may not constitute the primary activity in vivo. In collaboration with brd4, interacts with the positive transcription elongation factor b (P-TEFb) complex in its active form to regulate polymerase II promoter-proximal pause release for transcriptional activation of a large cohort of genes. Demethylates other arginine methylated-proteins such as esr1. Has no histone lysine demethylase activity (By similarity). Required for differentiation of multiple organs during embryogenesis. Acts as a key regulator of hematopoietic differentiation (By similarity).
Similarity
Belongs to the JMJD6 family.
Mass
46.516 kDa
Sequence
MNHKSKKRIKEAKRSARPELKDSQDWCRHNYCEVFSLNPSTVLDNVERVDAAQLTTEEFIERYEKPYKPVVIINATAGWPANEKWTLERLKRKYRNQKFKCGEDNDGYSVKMKMKYYIDYMEGTRDDSPLYIFDSSYGEHPKRKKILEDYEVPKYFRDDLFQFTGEKRRPPYRWFVMGPPRSGTGIHIDPLGTSAWNSLVHGHKRWCLFPTNTPRELIKVTRDEGGNQQDEAITWFNVVYPRTQLPSWPPEFKPLEILQKPGETVFVPGGWWHVVLNFDTAIAVTQNFASCSNFPVVWHKTVRGRPKLSRKWYRILKQERPELAALADTVDLQESTGIASDSSSDSSSSSSSSSSESCSEDDSSSGAEMMSRRKKKRRLCNGMGNGDITTQDDCASKERSSSR