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dbpA

Gene
dbpA
Protein
ATP-dependent RNA helicase DbpA
Organism
Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
Length
481 amino acids
Function
DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes.
Similarity
Belongs to the DEAD box helicase family. DbpA subfamily.
Mass
54.174 kDa
Sequence
MSKKSFSDYKLSKEIVRALTGLGYDHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAVYGKSPFARQKLELKQKTHIVVGTPGRVLDHIEKGTLSLECLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFSATLPEDVEKLSRTYMNSPTHIEIKAAGITTDKIEHTLFEVIEDEKLSLLKDVTTIENPDSCIIFCRTQENVDHVYRQLKRANYPCDKIHGGMVQEDRFEVMDDFRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYENRFLEEIEEYIGFEIPKAIGPSKEEVMKEKAAFEEKLHAKPIIKKDKNADINKGIMKLYFNGGKKKKIRAVDFVGTIAKIKGVTAEDIGIITIQDNVSYVEILNGKGPLVLKVMKTTTIKGKQLKVHEAIK

Gene
dbpA
Protein
ATP-dependent RNA helicase DbpA
Organism
Bacillus subtilis (strain 168)
Length
479 amino acids
Function
DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes (Probable).
Similarity
Belongs to the DEAD box helicase family. DbpA subfamily.
Mass
54.048 kDa
Sequence
MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCELANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFSLLKDVLMTENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDVAARGIDIENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISFVTAFEKRFLADIEEYIGFEIQKIEAPSQEEVARKKPEFLAKLNDRPESKKDKSEELNKDIMKLYFNGGKKKKIRAVDFVGTIAKIDGVSADDIGIITIMDNASYVEILNGKGPHVLKVMKNTTVKGKQLKVNKANK

Gene
dbpA
Protein
ATP-dependent RNA helicase DbpA
Organism
Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Length
470 amino acids
Function
DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes.
Similarity
Belongs to the DEAD box helicase family. DbpA subfamily.
Mass
52.986 kDa
Sequence
MNNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQTGSGKTAAFAIPIAEQVEWEENKPQALIIVPTRELAMQVKTECTNIGRFKRVKAAAIYGQSPFAKQKLELSQKNHIVVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFIDQVEDILSRLPKQRQNLFFSATMPEEMQDLIKRYQDNPMVIEMASEKTNPIFHVEMQTDNKEKTLKDVLITENPDSAIIFCNTKNQVDELTDLLDVKASKIHGGLRQEDRFRAMDDFKSGKSRFLIATDVAGRGIDVDNVSLVINYDLPIEKENYVHRIGRTGRAGKSGKAISFVKTNENPLLRDIEEMLDVTIEKKRKPTVIEVKVNEDAFRKKQQKRPTIKKARGEKLNKNIMKLYFNGGKKKKIRAVDFVGTISKLEGITAEDIGIITIEDHVSFVEILNGKGPAVLEMMRSRKVKGRRLKVNEARKR

Gene
dbpA
Protein
ATP-dependent RNA helicase DbpA
Organism
Escherichia coli (strain K12)
Length
457 amino acids
Function
DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. Requires a single-stranded RNA loading site on the 3' side of the substrate helix.
Similarity
Belongs to the DEAD box helicase family. DbpA subfamily.
Mass
49.188 kDa
Sequence
MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIATLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK

Gene
dbpA
Protein
Decorin-binding protein A
Organism
Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680)
Length
191 amino acids
Function
Binds to decorin which may mediate the adherence of B.burgdorferi to collagen fibers in skin and other tissues.
Similarity
Belongs to the decorin-binding protein family.
Mass
21.214 kDa
Sequence
MIKCNNKTFNNLLKLTILVNLLISCGLTGATKIRLERSAKDITDEIDAIKKDAALKGVNFDAFKDKKTGSGVSENPFILEAKVRATTVAEKFVIAIEEEATKLKETGSSGEFSAMYDLMFEVSKPLQKLGIQEMTKTVSDAAEENPPTTAQGVLEIAKKMREKLQRVHTKNYCTLKKKENSTFTDEKCKNN