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ORF6

Gene
ORF6
Protein
DNA primase
Organism
Varicella-zoster virus (strain Dumas)
Length
1083 amino acids
Function
Essential component of the helicase/primase complex. Unwinds the DNA at the replication forks and generates single-stranded DNA for both leading and lagging strand synthesis. The primase initiates primer synthesis and thereby produces large amount of short RNA primers on the lagging strand that the polymerase elongates using dNTPs.
Similarity
Belongs to the herpesviridae DNA primase family.
Mass
122.547 kDa
Sequence
MDKSSKPTIRLLFATKGCAISHSLLLLTGQISTEPLYVVSYTWTPDLDDVFVKNGREEITQVIPTKRPREVTENDEENQIMHLFCSRDVNVIFYLIGGFSTGDVRSRVWPIFFCCFKTQTDFKALYKALWYGAPLNPHIISDTLCISETFDIHSEVIQTLMVTTHHLNRKGLSDNGLCITEATLCKLVKKSVGRQELTSLYAHYERQVLAAYRRLYWGYGCSPFWYIVRFGPSEKTLVLATRYYLLQTDTSYNTLETPLYDLQAIKDLFLTYQVPALPNCSGYNISDLLSFDKLSMFCCSSTYTRGLTAKNALSYILQRIHTDTTEIHAVSEYITNDRKGLKVPDREFVDYIYLAHFECFNRKQIADHLQAVTYSDFVNKPVLLKSSNLGKRATANFFNHVRSRLNMRDYIKKNVICDVTELGPEIGHKYTITKTYTLSLTYAAKPSKFIGVCDLATTLTRRVENIEKQFSPYGWSSTIPSNPPGFDELSNFEDSGVSAEALRAANFANDTPNQSGRTGFDTSPGITKLLLFFSAATGIATHDVSILSYKTPLEALIGHSEVTGPMPVYRVALPHGAQAFAVIANDTWSSITNRYTLPHEARLIAEDLKQINPCNFVAASLRDMQLTLLLSTSVKNVSKISSNIPKDQLYINRNELFNTNLIITNLILDVDFHIRKPIPLGILHAGMRAFRHGILTAMQLLFPKAVVNPNKDPCYFYKTACPEPTVEVLDDDNLLDITSHSDIDFYIENGELYTCVEENYTEDVWFFDTQTTSEVHTHADVSNNENLHETLPCNCKEKIGFRVCVPIPNPYALVGSSTLKGFAQILQQAVLLEREFVEYIGPYLRDFSFIDTGVYSHGHSLRLPFFSKVTTTGTAVGQLLPFYVVPEQCIDILAFVTSHRNPANFHFHSRPQSNVPVQFILHNLGGEYAEFFERKVARNKQIFSSPQISLTKALKERGVTCLDAFTLEAFVDSTILESIVEHIAVHFPGRDREYTLTSSKCIAIKRDWVLFQLICGTKGFTCLRYPHRGGRTAPRTFVSLRVDHHNRLCISLAQQCFATKCDSNRMHTIFTLEVPNYPNLTSS

Gene
ORF6
Protein
DNA primase
Organism
Varicella-zoster virus (strain Oka vaccine)
Length
1083 amino acids
Function
Essential component of the helicase/primase complex. Unwinds the DNA at the replication forks and generates single-stranded DNA for both leading and lagging strand synthesis. The primase initiates primer synthesis and thereby produces large amount of short RNA primers on the lagging strand that the polymerase elongates using dNTPs.
Similarity
Belongs to the herpesviridae DNA primase family.
Mass
122.59 kDa
Sequence
MDKSSKPTIRLLFATKGCAISHSLLLLTGQISTEPLYVVSYTWTPDLDDVFVKNGREEITQVIPTKRPREVTENDEENQIMHLFCSRDVNVIFYLIGGFSTGDVRSRVWPIFFCCFKTQTDFKALYKALWYGAPLNPHIISDTLCISETFDIHSEVIQTLMVTTHHLNRKGLSDNGLCITEATLCKLVKKSVGRQELTSLYAHYERQVLAAYRRLYWGYGCSPFWYIVRFGPSEKTLVLATRYYLLQTDTSYNTLETPLYDLQAIKDLFLTYQVPALPNCSGYNISDLLSFDKLSMFCCSSTYTRGLTAKNALSYILQRIHTDTTEIHAVSEYITNDRKGLKVPDREFVDYIYLAHFECFNRKQIADHLQAVTYSDFVNKPVLLKSSNLGKRATANFFNHVRSRLNMRDYIKKNVICDVTELGPEIGHKYTITKTYTLSLTYAAKPSKFIGVCDLATTLTRRVENIEKQFSPYGWSSTIPSNPPGFDELSNFEDSVVSAEALRAANFANDTPNQSGRTGFDTSPGITKLLLFFSAATGIATHDVSILSYKTPLEALIGHSEVTGPMPVYRVALPQGAQAFAVIANDTWSSITNRYTLPHEARLIAEDLKQINPCNFVAASLRDMQLTLLLSTSVKNVSKISSNIPKDQLYINRNELFNTNLIITNLILDVDFHIRKPIPLGILHAGMRAFRHGILTAMQLLFPKAVVNPNKDPCYFYKTACPEPTVEVLDDDNLLDITSHSDIDFYIENGELYTCVEENYTEDVWFFDTQTTSEVHTHADVSNNENLHETLPCNCKEKIGFRVCVPIPNPYALVGSSTLKGFAQILQQAVLLEREFVEYIGPYLRDFSFIDTGVYSHGHSLRLPFFSKVTTTGTAVGQLLPFYVVPEQCIDILAFVTSHRNPANFHFHSRPQSNVPVQFILHNLGGEYAEFFERKVARNKQIFSPPQISLTKALKERGVTCLDAFTLEAFVDSTILESIVEHIAVHFPGRDREYTLTSSKCIAIKRDWVLFQLICGTKGFTCLRYPHRGGRTAPRTFVSLRVDHHNRLCISLAQQCFATKCDSNRMHTIFTLEVPNYPNLTSS

Gene
ORF6
Protein
Uncharacterized protein ORF6
Organism
Ostreid herpesvirus 1 (isolate France)
Length
676 amino acids
Mass
77.91 kDa
Sequence
MNPKDLTAVSKAISDLFYSKNEHIITVCSDYLRHWRDVVKQDDEVIVEKICSVCELENSCLTGEMITMFENVSVILPQDIFGVNVMFYIISRELEGTHSYHDLIRKLDPYSIFSHFILMDCSDANLKKEIDNATFFKNHYYKQKSGYVISNNNEESEEENEDLEDEECETVKKARKSSKKMPYMEGDDRIKSMGQTLGKWFEQNKTGCSKKDQTLLNYIQTQCTIANCGDLSLSITNRRMPTDSRKLVNWKWVANNTLYPKHGETLDDDMYGCCQVGAARCDYDNTLSELIDAVHNGRVKHSTVEMTKKKKADLLEVLMDPGKNNKKEDGDDPTLFFSINDMDQLLEGDDIIDMEEECEGDEDDVNAKGYDDLYDKKQKELYKKIETGMITVVRLHEMCNDLGIGDYFELILSATEFPCVICDLSILYEFRACFFDLINMSRMAASKVNLNRIKKPGKLFSKAIKNKTNAGCKPLVKGQFLGEKTELEITKRLDEVELTPKQLVDYSIFKCLGGGEDMMKTMAQLDKNNKMEDYGYNFFAEEISPPVLLRCMEGEWLDKFPFMRSIIDRIKDVALSHALPRKRIFCYINPRIMACECNIYETVRSRCLLGVKISLVNTMLKVMKRSQTKTILNQVSSICKEHGIAYEICNIHINKTMKEDKKIIKERLARKRSHPN

Gene
orf6
Protein
Cytochrome P450 monooxygenase orf6
Organism
Eupenicillium brefeldianum
Length
502 amino acids
Function
Cytochrome P450 monooxygenase; part of the gene cluster that mediates the biosynthesis of brefeldin A (BFA), a protein transport inhibitor that shows antiviral, antifungal, and antitumor properties (PubMed:24845309). The proposed biosynthesis of BFA involves formation of an acyclic polyketide chain that is differentially tailored throughout the backbone (PubMed:24845309). The highly reducing polyketide synthase Bref-PKS is proposed to synthesize the precisely reduced octaketide precursor, which could then be directly offloaded by the thiohydrolase enzyme Bref-TH followed by a cytochrome P450 monooxygenase-mediated formation of the cyclopentane ring and macrocyclization to afford 7-deoxy BFA. Alternatively, the first ring annulation can also occur on the ACP-tethered intermediate before the thiohydrolase release and lactonization (PubMed:24845309). The C7-hydroxylation by another cytochrome P450 monooxygenase is believed to be the final step in the process to obtain the final structure of BFA (PubMed:24845309). In addition to the HRPKS Bref-PKS and the thiohydrolase Bref-TH, the brefeldin A biosynthesis cluster contains 4 cytochrome p450 monooxygenases (called orf3 to orf6), as well a the probable cluster-specific transcription regulator orf8 (PubMed:24845309).
Similarity
Belongs to the cytochrome P450 family.
Mass
57.665 kDa
Sequence
MLALWVLAVALVAYFLCLSIYRLFLHPLANIPGPKLCALTGWYEVFWDIVVGGQFTFKIEEWHKTYGPVMRIGPNEVHFNDPDFYNELYTTTAAYQKPAEWRYRFGFGSALFDTVDHEHHAKRRAPLAAFFSRSKILEFSPFIQEQTDLLVQRIQEYEGQVICANEAFDALTMDIIGYYAFGLSYRSIDYPKFQAPCNHVTEDVARMVHTGAHFPWVFTILRSIPQAIVSLLAPPMKKIFKFNEEIAAQIRRILKNRVNLDQEKNFHRTIFHEILNSKLDPSELTQERLQMEAGSLVGAALETSKMTTALAIYYILAQPDVEKKLREELRTAMPDPGKILSVPELEQLPYLAACIREALRLAIGVSQRIRRYNPHAPTQYKNYTIPPNTVFGMCHWEQLRDARVWDRPYEFLPERWLANNGNPLALNGQPLAKYFVPFHRGPRGCLGKEMGMAQLNIGLATLFRRVDHLELFETDQSAVDIVADYFVPLCVKGSKGVRVLVK

Gene
ORF6
Protein
Capsid protein
Organism
Grapevine leafroll-associated virus 3 (isolate United States/NY1)
Length
313 amino acids
Function
Capsid protein self-assembles to form filamentous capsids, about 1400-2200 nm in length.
Similarity
Belongs to the closteroviridae capsid protein family.
Mass
34.809 kDa
Sequence
MAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQAELTGIAVVPEKYVFATAALATAAQEPPRQPPAQVAEPQETDIGVVPESETLTPNKLVFEKDPDKFLKTMGKGIALDLAGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADDAATKTEFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYENPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAILAWNLARQQAFRNKTVTADNTLHNVFQLLQKK

Gene
ORF6
Protein
Collagen-like protein V6
Organism
Sputnik virophage
Length
310 amino acids
Similarity
Belongs to the sputnik virus V6 family.
Mass
30.899 kDa
Sequence
MSLSTLFSPNTYNINSKSQTLNNLPSNPTSQTNTLWSNNAYNPPHLMFGSTDLSNGGGGGGQKGEKGDKGETGSNGLKGETGSNGLKGETGSGDKGDKGDSGTDGLKGQAGTDGLKGQAGTDGLKGDSGTDGLKGQTGNDGLKGQAGNDGIKGDKGEPGNDGLKGQTGTQGIKGDPGAKGDPGTSVVLSSGIWTPSVTFSTIFTGITPSTSIYSRIGNIVTFSIFTNATIPANMASGIIYFTVPVASSDFNGNNVIGTASITGNSTGVVQYGILTATASTAGIVLSMKIQASTSISVAIYATGQYFIPPG

Gene
ORF6
Protein
23kDa protein
Organism
Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
Length
222 amino acids
Function
May act as a regulatory factor during viral transcription.
Mass
25.455 kDa
Sequence
MEPHDQSGSTTRQLDEIRDRRGSQIRSVRLLPWRPFTRFPVCPSGTSPYSRGTHSQPSYVRCQNCERARQWFRAHDGPRCLHQRPDYSRLQAPPDPFQHLNSFEPILLAALSVLRPLPRDIQITIISCACDYFHSVRCASSRYLGSSRSAVKRRAARLNYCYKCGHPLYLNKPHTCRPGRLCSASISERLALLREGPIRSLTENPINARAAHFLAHELLDPR

Gene
ORF6
Protein
Capsid protein
Organism
Beet yellows virus (isolate Ukraine)
Length
204 amino acids
Function
Component that constitutes the body part of the virion. Also acts as a movement protein that is involved in local cell-cell movement via plamodesmata. At least five viral proteins, CP, CPm, p6, p64 and Hsp70h are essential for cell-cell movement.
Similarity
Belongs to the closteroviridae capsid protein family.
Mass
22.356 kDa
Sequence
MGSAEPISAIATFENVSLADQTCLHGEDCDKLRKNFEECLKLKGVPEDNLGIALGLCLYSCATIGTSNKVNVQPTSTFIKASFGGGKELYLTHGELNSFLGSQKLLEGKPNKLRCFCRTFQKDYISLRKEYRGKLPPIARANRHGLPAEDHYLAADFISTSTELTDLQQSRLLLARENATHTEFSSESPVTSLKQLGRGLGTGR

Gene
ORF6
Protein
Uncharacterized protein 6
Organism
Halorubrum pleomorphic virus 1
Length
181 amino acids
Mass
18.474 kDa
Sequence
MNKKSLLVVLVIALAVVPFAATAQTTPGQNQTAPNSSSPTVISQVDSITAITDYELRDGDLWIQFQSSGGNTLSITETAGSEGATQVRVRSVDIPRGTSTVTIDLFNSADGSVLITSRLSLEQNSGTVVSVSGGSAIISGPFTASDAQASGLGAAISVASVTLLLVFRASRGESTEGERIA

Gene
ORF6
Protein
Putative membrane protein ORF6
Organism
Ictalurid herpesvirus 1 (strain Auburn)
Length
138 amino acids
Mass
14.648 kDa
Sequence
MNSLTIIFLLSGLTAYHAVLADGTGSSESVTAGDSGVVVLVMIGALLTLLMTIPIIGLFGIYVRTRASIEEMRGILMQIHLRLITGDQRSNRGDVELGAGASLLTISSQPPSYAEALLMEPVEPQQQEGVPLEAEIRV

Gene
ORF6
Protein
14.7 kDa protein
Organism
Shallot virus X
Length
128 amino acids
Function
May act as a regulatory factor during viral transcription.
Mass
14.742 kDa
Sequence
MHPHDLNLLCCLHFSKPSLPNDLKTLLFRACETSCKLNRRLLDNKPFQGTSKCAKRRRAKRYNRCFDCGAYLYDDHVCKRFTSRSNSDCLSVIHQGPAKLYAEGAYRANSDAEQLIMNDMLLIKSLKL

Gene
ORF6
Protein
Uncharacterized protein ORF6
Organism
Spiroplasma virus SpV1-R8A2 B
Length
113 amino acids
Mass
13.626 kDa
Sequence
MDMKFWTTKEYKKIKRDFIIRNFAFGFCYFLFLISFIMCIVCFIISINFEVEIILVILFPFLLLILSVWNLFDLIMEHISEIKRFKVTVLKKQIEELEGKMLRGLRVGVDKIE

Gene
ORF6
Protein
Uncharacterized protein ORF6
Organism
Beak and feather disease virus
Length
88 amino acids
Mass
9.846 kDa
Sequence
MKTSPRLSVIDGVGEEVRPDLFQLVHVVPPNTCEPPEQWLRVTVLLVPGLGGLIARDNYPLAGKLHKSALDWHFMWITVAEAEHLAIR

Gene
ORF6
Protein
Uncharacterized protein ORF6
Organism
Chlamydia phage 1
Length
82 amino acids
Mass
9.426 kDa
Sequence
MESLVKLHIGLIDMLASCCLLCFSICLESIQLEERFLLLILVMLLLRVLKVLILSFRICLVRLFSVIILDIMFRKDGEGNEV

Gene
ORF6
Protein
Uncharacterized protein ORF6
Organism
Spiroplasma virus 4
Length
71 amino acids
Mass
8.52 kDa
Sequence
MKLSKKKMQRIDNTLEKLFEWSHLNGYDNWLTNQLALEKEIEQGYRCETCKLVIKSVNKDEIVCKCINEKR

Gene
ORF6
Protein
Uncharacterized protein ORF6
Organism
Barley yellow dwarf virus (isolate PAV)
Length
63 amino acids
Mass
6.663 kDa
Sequence
MEDLHVIAVCILALTVLSGVGAVLSCCRWCCSNPFPPSLSSVQAKDSRSVRETIKNIEGASAQ

Gene
ORF6
Protein
Uncharacterized ORF6 protein
Organism
Lolium latent virus (isolate Lolium/USA/US1/-)
Length
45 amino acids
Mass
5.073 kDa
Sequence
MAPPTREYRCTPNYHSARHQMSSLLGLCKGGVGPQPRPWCEKTMV

Gene
ORF6
Protein
Uncharacterized protein ORF6
Organism
His1 virus (isolate Australia/Victoria)
Length
29 amino acids
Mass
3.242 kDa
Sequence
MLTVKIINGDGAIDKHLTLNEKEAFKKTI