Protein
Putative DNA-directed RNA polymerase 008R
Organism
Frog virus 3 (isolate Goorha)
Function
Component of the DNA-dependent RNA polymerase that catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Forms the polymerase active center together with the second largest subunit (By similarity).
Similarity
Belongs to the RNA polymerase beta' chain family.
Sequence
MEMFASKSLQVEGLLFGVCSPEEILATSVVEVTKSCLKAETGSVYDPRMGSAGVDDDDALCPTCENTGRECPGHFGHIELAKPVVLFYKETVAWLKRCCHVCGTVGNEPRPFFFAPYSACNACGAQRPLVRLVDAHDPCAIRVTVRRKDGEPETMPPELILATLDRVRDSDVDRVLGRGKGSHVRFHPRRLVMTRMPVLPPCCRPNARQWPDGAMQDDNLSVFVSQIVKVNQRIKALEPDNPAVEGLVAQLRLKTLCFVDNTKGKVMHATNRKPMAGIKERIGKKGGLLRQNIMGKRRNQTGRSVVGPDGTLEVDEVGVPEAIADNLTVPVMVTPFNVSSLEAMMRDGRVSSVEMRDGTVHRPSEWRPSHGDHMETADGSPLGRVTRPSYDARDPSVVLRSWKTGETVTRPPPFSWPKLEPGMTVTRCLVDGDPVALNRQPTLHRNSMLGMRVKRLPGKTIRLNLSVTSGFNMDFDGDEGNLYLPQGPQARSETMLLMNPKSVIMSARGPHAEVSLVQDGVLGCHLMSLNSEIPCPPEELATCLMEVHGCEGWDVRDVEKGATPRDLLSSVLPSTLTVDCGGGCRIESGKIVSGHLTKSAVKKIVRAVCLENGGDAAGKLVDKLQFLTNAWLSHRPFSVGYSDCLTERPEETVRMVADAVCSKILEAEAADDEDGVSVALCGARDRGQAVTCAALTPDNRMAVMSRAQSKGDMFNLTQIAGLLGQQYVGGSRPGKEIDGGRRSLPHYPRVWDLEQTTLKYESRGFVRSSFLKGLNPREVFFHAKSGREGMISTSQMTGVTGYAERKMVKLNEDLVSAYDGTVRDAMGNVVQFVYGGHGMDPQRCWSDGCPVNFKTLAEECSSQECSSQISGLRSPAVTSVEEASLLVPVGLCPGAPDPVRESLFLKHASVILKGAEEHPCEDHSAWRERVARSYAAAVLCPGEAVGVLCAQSIGAKQTQQTLDTFHKAGVWLDDAGSVPFGELLGLSQKPMRRQCVVPLKVDPSTPGDEVRDLVGCSFVRRDLLDLLAVRPSTATVGKTASLELDPVKCFELRISPADVAYAVAEKFPPPHFDVSVSSFGVTLSWSVNYPVDNLFTGLFSVQVGGTPGVESYRLLRGRDGGWVAVTKGTNLGAFLCHPLADWERVRTDDVWDVYETLGLAAAKKRLYELMFSCVGDNLYPAHIKLLTDRMMRRGRPTPIDRYTMRTCEVGPLSRAAFEESLDILTGAGCTAETEHCAGAGARVAAGLPVRAGTGYMGLLCGKGFFDEPVVKVPDADGREYVDYSYSDDESFEW