Protein
Probable rhamnogalacturonate lyase C
Organism
Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Function
Pectinolytic enzymes consist of four classes of enzymes: pectin lyase, polygalacturonase, pectin methylesterase and rhamnogalacturonase. Degrades the rhamnogalacturonan I (RG-I) backbone of pectin (By similarity).
Similarity
Belongs to the polysaccharide lyase 4 family.
Sequence
MFASTLRKTFVFLGLATYSAAALTTTSNSTHYTISNSRFSVAVAKSNGHVVDANLDGQDLLGPLSGNSGKGPYLDCSCTPEGFWTPGAEPALVNGTDSTGTPYVGVIMTDTYETTNQTLSQYLFLRGEETGLHAFSRVTYYNESDYFLRGLGELRTLFRPNTNLWTHFSGSEGNYGPMPLSSTEKITVQDATTYLGDTTDDPYVSQYSDYFTKYTLTESWRDHDVHGHFSNGSTSGDGNTYGAWLVHNTRETYYGGPLHADLVVDGIVYNYIVSGHYGAPNPNLTHGFDRTFGPQYYHFNSGGPGTTLEELRADAAQYASPEWNAEFYDSIAKHIPNYVPSTGRTTFRGKVNLPKGAKKPIIVLSENEQDFQLNVFKKDSLQYWAEIDGSGAFTIPRVVKGTYRVTIYADEIFGWFIKDNVKVIGSNAHTFTWKEETAGKEIWRIGVPDKSSGEFLHGYAPDTSKPLQPEQYRIYWGKYDYPSDFPEGVNYHVGKSDPAKDLNYIHWSFFPSQGNHLRNEPYYQNVNNWTITFDLTASQLRNTKTATFTVQLAGTRNANGNSKWNPDPAKYNNLPWTVNVNGIYEDTWEIPYWRSGSCGVRSGVQCQNTEHKFVFDAGKLRKGRNEFVLSLPFNATSVETALLPNSLYVQVVSMEAVSVSNDMRVLVQAFMPLVTWGTAVEKRVLLTGIVSVSAMAKEDYPMISRPCPRKGGTRRRKKERKKEGKKQGRTVLDALLQRSEQDSFWSRFCRSPIESVAQYVYGQGSTALRKKTTDNLVRVVCVSDTHNTKPNLPDGDILIHAGDLTESGTKEELEKQIYWLDSQPHRYKIVIAGNHETFLDRNYHSHHGNERVTMDWKSLIYLENTSAILDLGAGHQLKVFGSPYTPKHGNGAFQYPRTDTTTWEEIPKDTDLLVTHGPPKAHLDLGHLGCRVLRQALWEMESRPLLHVFGHIHGGYGKEVVCWDLCQRAYEAIMDGESRWWNLCVLFYCWILRLFFDWTADGRATVLVNAATVGGVRDLKRREAICVDIQAGSKRFLSGCT