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fimD

Gene
fimD
Protein
Outer membrane usher protein FimD
Organism
Escherichia coli (strain K12)
Length
878 amino acids
Function
Involved in the export and assembly of FimA fimbrial subunits across the outer membrane.
Similarity
Belongs to the fimbrial export usher family.
Mass
96.482 kDa
Sequence
MSYLNLRLYQRNTQCLHIRKHRLAGFFVRLVVACAFAAQAPLSSADLYFNPRFLADDPQAVADLSRFENGQELPPGTYRVDIYLNNGYMATRDVTFNTGDSEQGIVPCLTRAQLASMGLNTASVAGMNLLADDACVPLTTMVQDATAHLDVGQQRLNLTIPQAFMSNRARGYIPPELWDPGINAGLLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSSDRSSGSKNKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASDDNMLPDSQRGFAPVIHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTVPYSSVPLLQREGHTRYSITAGEYRSGNAQQEKTRFFQSTLLHGLPAGWTIYGGTQLADRYRAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSLNESGTNIQLVGYRYSTSGYFNFADTTYSRMNGYNIETQDGVIQVKPKFTDYYNLAYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPFSHWLRSDSKSQWRHASASYSMSHDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGDGNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGVLAHANGVTLGQPLNDTVVLVKAPGAKDAKVENQTGVRTDWRGYAVLPYATEYRENRVALDTNTLADNVDLDNAVANVVPTRGAIVRAEFKARVGIKLLMTLTHNNKPLPFGAMVTSESSQSSGIVADNGQVYLSGMPLAGKVQVKWGEEENAHCVANYQLPPESQQQLLTQLSAECR

Gene
fimD
Protein
Outer membrane usher protein FimD
Organism
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Length
870 amino acids
Function
Involved in the export and assembly of FimA fimbrial subunits across the outer membrane.
Similarity
Belongs to the fimbrial export usher family.
Mass
95.128 kDa
Sequence
MKKTTWFAGRFPGYVSPLSSVALSVLAALCPLTSRGESYFNPAFLSADTASVADLSRFEKGNHQPPGIYRVDIWRNDEFVATQDIRFEAGAVGTGDKSGGLMPCFTPEWIKRLGVNTAAFPVSDKGVDTTCIHLPEKIPGAEVAFDFASMRLNISLPQASLLNSARGYIPPEEWDEGIPAALINYSFTGSRGTDSDSYFLSLLSGLNYGPWRLRNNGAWNYSKGDGYHSQRWNNIGTWVQRAIIPLKSELVMGDSNTGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKLTIRQNGYVIYQSYVSPGAFAITDLNPTSSSGDLEVTVDEKDGSQQRYTVPYSTVPLLQREGRVKYDLVAGDFRSGNSQQSSPFFFQGTVIAGLPAGLTAYGGTQLADRYRAVVVGAGRNLGDWGAVSVDVTHARSQLADDSTHQGQSLRFLYAKSLNNYGTNFQLLGYRYSTRGFYTLDDVAYRSMEGYDYEYDSDGRRHKVPVAQSYHNLRYSKKGRFQVNISQNLGDYGSLYLSGSQQNYWNTADTNTWYQLGYASGWQGISYSLSWSWSESVGSSGADRILAFNMSVPFSVLTGRRYARDTILDRTYATFNANRNRDGDNSWQTGVGGTLLEGRNLSYSVTQGRSSSNGYSGSASASWQATYGTLGVGYNYDRDQHDYNWQLSGGVVGHADGITFSQPLGDTNVLIKAPGAKGVRIENQTGVKTDWRGYAVMPYATVYRYNRVALDTNTMDNHTDVENNVSSVVPTEGALVRAAFDTRIGVRAIITARLGGRPLPFGAIVRETASGITSMVGDDGQIYLSGLPLKGELFIQWGEGKNARCIAPYALAEDSLKQAITIASATCIRPAS

Gene
fimD
Protein
Major fimbrium tip subunit FimD
Organism
Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561)
Length
670 amino acids
Function
Probably a component of the fimbrium tip (PubMed:17526848, PubMed:19506009). These long, filamentous pili are attached to the cell surface; they mediate biofilm formation, adhesion onto host cells and onto other bacteria that are part of the oral microbiome (PubMed:17526848). They play an important role in invasion of periodontal tissues and are major virulence factors. FimC, FimD and FimE contribute to interaction with host CXCR4 and thereby down-regulate the TLR2-mediated host immune response (PubMed:17675496, PubMed:19506009).
Similarity
Belongs to the FimD family.
Mass
75.848 kDa
Sequence
MRTNRILNIICPPILFLLVGFLFGCVREDIESDMNETSSLFLQVQPYNQRSEEGGVAAYDENTIERLTLVFYKNGTKVWQAEPVETSPSSNSYYVPVPESMYGQFNGNNSFKIYLVANVNFSGSFEPNASETSFLKTLVPNSILLQNDGKPEDKFAMIGSVEKQINMATSEGKQLGSIELKRVAAKLRLKKPVLNISDYELVGDPKAKFRNCMPKGFLSVEEKPEGVGYEAIDYRPMTEANSSVHFYSYYNEWALNNEGRPEFVMMLKLKKTGTDDNTAKPYYYRIPVDGSDKKIRSNHLYDMAVTIEVLGSLNEEDPVTINGSLSVIEWTSHSDDQTLPDVQYLEVIPQETVMNMTTEIELDYFSSHSLLPPADVKATCTYVNSNGQQITDTYTGANVPTVTIDANTKKIKVRSILPINNIPKDISFTIKNSIGFEKKIKIRQNPSQFIINTFGTKSSWQPEGNLAPNLNNKAIYQIVVLSPPADGNMIIGFPPTKEVGFYKKSGSSYTLKHTDRITEQDEQTANMVSPSFELASQLGATLVQDHWEYYTLNPLRLIYHSNQQNRYALMTCAFYWEERKKADGTIERLDDWRLPTRAEIQLVDKLQREQAGVVRDIMTGRYYWSGLPDKAIKILLPTASGNATEQRAHVRCVRDVKNDRFVKSAKRLKK

Gene
fimD
Protein
Major fimbrium tip subunit FimD
Organism
Porphyromonas gingivalis
Length
670 amino acids
Function
Probably a component of the fimbrium tip. These long, filamentous pili are attached to the cell surface; they mediate biofilm formation, adhesion onto host cells and onto other bacteria that are part of the oral microbiome. They play an important role in invasion of periodontal tissues and are major virulence factors. FimC, FimD and FimE contribute to interaction with host CXCR4 and thereby down-regulate the TLR2-mediated host immune response.
Similarity
Belongs to the FimD family.
Mass
75.848 kDa
Sequence
MRTNRILNIICPPILFLLVGFLFGCVREDIESDMNETSSLFLQVQPYNQRSEEGGVAAYDENTIERLTLVFYKNGTKVWQAEPVETSPSSNSYYVPVPESMYGQFNGNNSFKIYLVANVNFSGSFEPNASETSFLKTLVPNSILLQNDGKPEDKFAMIGSVEKQINMATSEGKQLGSIELKRVAAKLRLKKPVLNISDYELVGDPKAKFRNCMPKGFLSVEEKPEGVGYEAIDYRPMTEANSSVHFYSYYNEWALNNEGRPEFVMMLKLKKTGTDDNTAKPYYYRIPVDGSDKKIRSNHLYDMAVTIEVLGSLNEEDPVTINGSLSVIEWTSHSDDQTLPDVQYLEVIPQETVMNMTTEIELDYFSSHSLLPPADVKATCTYVNSNGQQITDTYTGANVPTVTIDANTKKIKVRSILPINNIPKDISFTIKNSIGFEKKIKIRQNPSQFIINTFGTKSSWQPEGNLAPNLNNKAIYQIVVLSPPADGNMIIGFPPTKEVGFYKKSGSSYTLKHTDRITEQDEQTANMVSPSFELASQLGATLVQDHWEYYTLNPLRLIYHSNQQNRYALMTCAFYWEERKKADGTIERLDDWRLPTRAEIQLVDKLQREQAGVVRDIMTGRYYWSGLPDKAIKILLPTASGNATEQRAHVRCVRDVKNDRFVKSAKRLKK

Gene
fimD
Protein
Putative fimbrial assembly protein FimD, serogroup D
Organism
Dichelobacter nodosus
Length
394 amino acids
Mass
45.147 kDa
Sequence
MFKKFLWRDCVFIIVLITAIALPAYIHTNYPQAFSRFFYPVEAWFTKRDLRCSKNAPHFLRQLLIEMIDEQKSLNNQVAFWHNGQLFHCESGWEDGFRGEKPMRVNSRFRYASVTKVLTSALVLHAINEQKLSLDSKIIELLELPAPKDPRVAAITIKMLLEHSAGFDRLKTYMPMLTMDVKPWCPTNLAQLSKTKLDFDPETQFQYSNVGYCLLGAAIEKAYGRTFQSVAEDYFQLKKYGIAFVGDRFLPDEIQYDYRFESFYSEFYLKHFDFKDSLYAVGGLSGSAADIVQLLAALPKEAPLTIFSHNHTPCSINMLDACYGYALQPYQASGQSYTLWGKSGFFPGVNTDVFLDEQGNILATLRAASAKKTADTLLLRQYAYSLMNEYVNQK

Gene
fimD
Protein
Probable fimbrial assembly protein FimD, serogroup H1
Organism
Dichelobacter nodosus
Length
394 amino acids
Mass
45.106 kDa
Sequence
MFKKFLWRDCVFIIVLITTIALPAYIHTNYPQAFSRFFYPVEAWFTKRDLRCSKNAPHFLRQLLIEMIDEQKSLNNQVAFWHNGQLFHCESGWEDGFRGEKPMRVNSRFRYASVTKVLTSALVLHAINEQKLSLDSKIIELLELPAPKDPRVAAITIKMLLEHSAGFDRLKTYTPMLTMDVKPWCPTNLAQLSETKLDFDPETQFQYSNVGYCLLGAAIEKAYGRSFQSVAEDYFQLKKYGVSYVGDGFLPDEIQYDYRFEPFYAESYSKHFDFKDSLYAVGGLSGSAADIVQLLAALPKETPLTIFSHNHAPCSINILDACYGYALQPYQASRQSYTLWGKSGFFPGVNTDVFLDEQGNILATFRAASTKKTADTLLLRQYAYSLMNEYVNQK