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U53

Gene
U53
Protein
Capsid scaffolding protein
Organism
Human herpesvirus 6A (strain Uganda-1102)
Length
528 amino acids
Function
Assembly protein: Plays a major role in capsid assembly. Acts as a scaffold protein by binding major capsid protein. Multimerizes in the nucleus such as major capsid protein forms the icosahedral T=16 capsid. Cleaved by assemblin after capsid completion. The cleavages products are evicted from the capsid before or during DNA packaging.
Similarity
Belongs to the herpesviridae capsid scaffolding protein family.
Mass
58.636 kDa
Sequence
MSKVWVGGFLCVYGEEPSEECLALPRDTVQKELGSGNIPLPLNINHNEKATIGMVRGLFDLEHGLFCVAQIQSQTFMDIIRNIAGKSKLITAGSVIEPLPPDPEIECLSSSFPGLSLSSKVLQDENLDGKPFFHHVSVCGVGRRPGTIAIFGREISWILDRFSCISESEKRQVLEGVNVYSQGFDENLFSADLYDLLADSLDTSYIRKRFPKLQLDKQLCGLSKCTYIKASEPPVEIIVAATKVAGDQVQLTTEPGSELAVETCDVPVVHGNYDAVESATATTAMSNQNLPNTTPLLSSPPFSDCVFLPKDAFFSLLNVTTGQQPKIVPPVSVHPPVTEQYQMLPYSESAAKIAEHESNRYHSPCQAMYPYWQYSPVPQYPAALHGYRQSKTLKKRHFQSDSEDELSFPGDPEYTKKRRRHRVDNDDDKEMAREKNDLRELVDMIGMLRQEISALKHVRAQSPQRHIVPMETLPTIEEKGAASPKPSILNASLAPETVNRSLAGQNESTDLLKLNKKLFVDALNKMDS

Gene
U53
Protein
Capsid scaffolding protein
Organism
Human herpesvirus 6B (strain Z29)
Length
528 amino acids
Function
Assembly protein: Plays a major role in capsid assembly. Acts as a scaffold protein by binding major capsid protein. Multimerizes in the nucleus such as major capsid protein forms the icosahedral T=16 capsid. Cleaved by assemblin after capsid completion. The cleavages products are evicted from the capsid before or during DNA packaging.
Similarity
Belongs to the herpesviridae capsid scaffolding protein family.
Mass
58.835 kDa
Sequence
MSKVWVGGFLCVYGEEPSEECLALPRDTVQKELRSGNIPLPLNINHNEKATIGMVRGLFDLEHGLFCVAQIQSQTFMDIIRNIASKSKLIAAGSVIEPLPPDPEIECLSSSFPGLSLSSKVLQDENLDGKPFFHHVSVCGVGRRPGTIAIFGREISWILDRFSCISESEKRQVLEGVNVYSQGFDENLFSADLYDLLADSLDTSYIRKRFPKLQLDKQLCGLSKCTYIKASEPPVEIIVATGKVAGDQVQLTTEPGSELAVETCDVSVVHGNYDAVESATATTAMSNQNLPNTTPLLSSPPFSDCVFLPKDAFFSLLNVTTGQQPKVVPPVSVHPPVTEQYQMLPYSESAAKIAEQESNRYHSPCQTMYPYWQYSPVPQYPAVLHGYRQPKTFKKRHFQSDSEDELSFPGDPEYTKKRRRHKVDNDDDKEMAREKNDLRELVDMIGMLRQEINALKHVRAQSPQRHVVPMETLPTIEEKGAASPKPSILNASLTPETVNRSLAGQNESMDLLKLNKKLFVDALNKMDS

Gene
U53
Protein
Capsid scaffolding protein
Organism
Human herpesvirus 7 (strain JI)
Length
512 amino acids
Function
Assembly protein: Plays a major role in capsid assembly. Acts as a scaffold protein by binding major capsid protein. Multimerizes in the nucleus such as major capsid protein forms the icosahedral T=16 capsid. Cleaved by assemblin after capsid completion. The cleavages products are evicted from the capsid before or during DNA packaging.
Similarity
Belongs to the herpesviridae capsid scaffolding protein family.
Mass
57.248 kDa
Sequence
METVLVAGFLCVYDDNDINDNFYLPRRTIQEEINSGNGLNIPLNINHNENAVIGTVSSLSVYSTVCFVARVQSKEFLTIIKKIAAKSKLITNTEEKTLPPDPEIECLNSIFPGLSLSNRVGGNERDPFFKHVSICGVGRRPGTIAIFGRNLNWILDRFSSITEAEKEKILSTDQSCVQFFAEEQFKVDLYDLLADSLDTSYIKVRFPKLQSDKQLSGISKSTYIKASENLTANNHTINVNSKVTKETEATDSVSQDDCAVHAPDLISTICSTTHTTHHDLVRMNGSATGNSASLPAPQFSECVFLPKDTFCSLLNATAGAQNKNVTPAAPIFKTDEYITPYPESLSRVDYGNRMNYHIPPPYWYPSMPGFNYKSYRGSQKRCAPTDSDDEMSFPGDPDYTTKKKKRYREDDDRELTKDKNDIKELVDAIGMLRHEISALKYIRSQSPQRQHCTAVDTMPTIEEKNVASPKPSVVNASLTPGQDRNQNLMQSDQSLLSLNKKLFVEALNKMDN